Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.15■□□□□ 0.34
Stra6O70491 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Stra6O70491 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra6O70491 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.15■□□□□ 0.34
Stra6O70491 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra6O70491 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra6O70491 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stra6O70491 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.14■□□□□ 0.33
Stra6O70491 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Gm14701-201ENSMUST00000117156 348 ntBASIC17.14■□□□□ 0.33
Stra6O70491 Gm13365-201ENSMUST00000121188 973 ntBASIC17.14■□□□□ 0.33
Stra6O70491 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.14■□□□□ 0.33
Stra6O70491 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.14■□□□□ 0.33
Stra6O70491 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Stra6O70491 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.14■□□□□ 0.33
Stra6O70491 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Stra6O70491 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.14■□□□□ 0.33
Stra6O70491 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Stra6O70491 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.14■□□□□ 0.33
Stra6O70491 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stra6O70491 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Stra6O70491 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.13■□□□□ 0.33
Stra6O70491 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Gm9385-201ENSMUST00000117563 472 ntBASIC17.13■□□□□ 0.33
Stra6O70491 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Gm27494-201ENSMUST00000184735 189 ntBASIC17.13■□□□□ 0.33
Stra6O70491 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stra6O70491 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stra6O70491 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Gm14722-201ENSMUST00000118943 689 ntBASIC17.12■□□□□ 0.33
Stra6O70491 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.12■□□□□ 0.33
Stra6O70491 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Stra6O70491 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.12■□□□□ 0.33
Stra6O70491 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.12■□□□□ 0.33
Stra6O70491 Thap2-203ENSMUST00000218989 527 ntBASIC17.12■□□□□ 0.33
Stra6O70491 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Stra6O70491 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Stra6O70491 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.12■□□□□ 0.33
Stra6O70491 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stra6O70491 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Stra6O70491 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.11■□□□□ 0.33
Stra6O70491 Gm10499-201ENSMUST00000174094 934 ntBASIC17.11■□□□□ 0.33
Stra6O70491 Gm45612-201ENSMUST00000211320 160 ntBASIC17.11■□□□□ 0.33
Stra6O70491 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.11■□□□□ 0.33
Stra6O70491 Gm8396-201ENSMUST00000057361 823 ntBASIC17.11■□□□□ 0.33
Stra6O70491 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Stra6O70491 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.11■□□□□ 0.33
Stra6O70491 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Stra6O70491 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms