Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vamp4O70480 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vamp4O70480 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vamp4O70480 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.58■□□□□ 0.73
Vamp4O70480 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vamp4O70480 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vamp4O70480 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vamp4O70480 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Vamp4O70480 Gm6443-201ENSMUST00000203599 874 ntBASIC19.58■□□□□ 0.72
Vamp4O70480 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vamp4O70480 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vamp4O70480 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
Vamp4O70480 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Vamp4O70480 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vamp4O70480 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Vamp4O70480 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vamp4O70480 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Vamp4O70480 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vamp4O70480 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Vamp4O70480 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.57■□□□□ 0.72
Vamp4O70480 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.57■□□□□ 0.72
Vamp4O70480 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.57■□□□□ 0.72
Vamp4O70480 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.57■□□□□ 0.72
Vamp4O70480 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.57■□□□□ 0.72
Vamp4O70480 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.57■□□□□ 0.72
Vamp4O70480 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vamp4O70480 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Vamp4O70480 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.56■□□□□ 0.72
Vamp4O70480 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Gm18206-201ENSMUST00000207027 926 ntBASIC19.56■□□□□ 0.72
Vamp4O70480 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Vamp4O70480 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Vamp4O70480 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.56■□□□□ 0.72
Vamp4O70480 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vamp4O70480 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.56■□□□□ 0.72
Vamp4O70480 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.55■□□□□ 0.72
Vamp4O70480 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vamp4O70480 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vamp4O70480 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vamp4O70480 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vamp4O70480 Gm14140-201ENSMUST00000119999 995 ntBASIC19.55■□□□□ 0.72
Vamp4O70480 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.55■□□□□ 0.72
Vamp4O70480 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.55■□□□□ 0.72
Vamp4O70480 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC19.55■□□□□ 0.72
Vamp4O70480 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
Vamp4O70480 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vamp4O70480 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vamp4O70480 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC19.55■□□□□ 0.72
Vamp4O70480 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vamp4O70480 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vamp4O70480 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp4O70480 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.54■□□□□ 0.72
Vamp4O70480 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Vamp4O70480 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.54■□□□□ 0.72
Vamp4O70480 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp4O70480 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.54■□□□□ 0.72
Vamp4O70480 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp4O70480 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp4O70480 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
Vamp4O70480 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.54■□□□□ 0.72
Vamp4O70480 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.54■□□□□ 0.72
Vamp4O70480 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.54■□□□□ 0.72
Vamp4O70480 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp4O70480 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Vamp4O70480 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp4O70480 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Vamp4O70480 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp4O70480 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vamp4O70480 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Vamp4O70480 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.53■□□□□ 0.72
Vamp4O70480 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vamp4O70480 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vamp4O70480 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Vamp4O70480 Gm10499-201ENSMUST00000174094 934 ntBASIC19.53■□□□□ 0.72
Vamp4O70480 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.53■□□□□ 0.72
Vamp4O70480 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.53■□□□□ 0.72
Vamp4O70480 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms