Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.74□□□□□ -0.05
Rdh5O55240 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.74□□□□□ -0.05
Rdh5O55240 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.74□□□□□ -0.05
Rdh5O55240 Gm27459-201ENSMUST00000184860 107 ntBASIC14.74□□□□□ -0.05
Rdh5O55240 Gm43347-201ENSMUST00000200226 580 ntBASIC14.74□□□□□ -0.05
Rdh5O55240 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.74□□□□□ -0.05
Rdh5O55240 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Rdh5O55240 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Rdh5O55240 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rdh5O55240 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Rdh5O55240 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rdh5O55240 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.73□□□□□ -0.05
Rdh5O55240 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Rdh5O55240 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rdh5O55240 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.73□□□□□ -0.05
Rdh5O55240 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rdh5O55240 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.73□□□□□ -0.05
Rdh5O55240 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rdh5O55240 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.72□□□□□ -0.05
Rdh5O55240 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.72□□□□□ -0.05
Rdh5O55240 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rdh5O55240 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.72□□□□□ -0.05
Rdh5O55240 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.72□□□□□ -0.05
Rdh5O55240 Gm18622-201ENSMUST00000219361 595 ntBASIC14.72□□□□□ -0.05
Rdh5O55240 Mzt1-203ENSMUST00000227948 952 ntBASIC14.72□□□□□ -0.05
Rdh5O55240 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.72□□□□□ -0.05
Rdh5O55240 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rdh5O55240 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Rdh5O55240 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Rdh5O55240 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.71□□□□□ -0.05
Rdh5O55240 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.71□□□□□ -0.05
Rdh5O55240 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.71□□□□□ -0.05
Rdh5O55240 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rdh5O55240 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.71□□□□□ -0.05
Rdh5O55240 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rdh5O55240 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rdh5O55240 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rdh5O55240 Sybu-209ENSMUST00000228639 4113 ntBASIC14.71□□□□□ -0.06
Rdh5O55240 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rdh5O55240 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rdh5O55240 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms