Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.44□□□□□ -0.1
BckdkO55028 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
BckdkO55028 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.44□□□□□ -0.1
BckdkO55028 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.44□□□□□ -0.1
BckdkO55028 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
BckdkO55028 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
BckdkO55028 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
BckdkO55028 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
BckdkO55028 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
BckdkO55028 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.43□□□□□ -0.1
BckdkO55028 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.43□□□□□ -0.1
BckdkO55028 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
BckdkO55028 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.43□□□□□ -0.1
BckdkO55028 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
BckdkO55028 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
BckdkO55028 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.42□□□□□ -0.1
BckdkO55028 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
BckdkO55028 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
BckdkO55028 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.42□□□□□ -0.1
BckdkO55028 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.42□□□□□ -0.1
BckdkO55028 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
BckdkO55028 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.42□□□□□ -0.1
BckdkO55028 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BckdkO55028 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.42□□□□□ -0.1
BckdkO55028 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.42□□□□□ -0.1
BckdkO55028 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
BckdkO55028 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
BckdkO55028 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.42□□□□□ -0.1
BckdkO55028 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
BckdkO55028 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.42□□□□□ -0.1
BckdkO55028 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BckdkO55028 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms