Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cacna1bO55017 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cacna1bO55017 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15□□□□□ -0.01
Cacna1bO55017 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15□□□□□ -0.01
Cacna1bO55017 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15□□□□□ -0.01
Cacna1bO55017 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15□□□□□ -0.01
Cacna1bO55017 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15□□□□□ -0.01
Cacna1bO55017 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1bO55017 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1bO55017 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
Cacna1bO55017 Gm17837-201ENSMUST00000186435 985 ntBASIC14.99□□□□□ -0.01
Cacna1bO55017 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1bO55017 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.99□□□□□ -0.01
Cacna1bO55017 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.99□□□□□ -0.01
Cacna1bO55017 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1bO55017 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cacna1bO55017 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.99□□□□□ -0.01
Cacna1bO55017 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Gm5779-201ENSMUST00000218467 910 ntBASIC14.99□□□□□ -0.01
Cacna1bO55017 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cacna1bO55017 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.98□□□□□ -0.01
Cacna1bO55017 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.98□□□□□ -0.01
Cacna1bO55017 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cacna1bO55017 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cacna1bO55017 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Gm7653-201ENSMUST00000214567 508 ntBASIC14.98□□□□□ -0.01
Cacna1bO55017 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.98□□□□□ -0.01
Cacna1bO55017 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.98□□□□□ -0.01
Cacna1bO55017 Sybu-209ENSMUST00000228639 4113 ntBASIC14.98□□□□□ -0.01
Cacna1bO55017 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cacna1bO55017 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.98□□□□□ -0.01
Cacna1bO55017 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cacna1bO55017 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cacna1bO55017 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cacna1bO55017 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.97□□□□□ -0.01
Cacna1bO55017 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.97□□□□□ -0.01
Cacna1bO55017 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.97□□□□□ -0.01
Cacna1bO55017 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.97□□□□□ -0.01
Cacna1bO55017 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cacna1bO55017 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms