Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccr6O54689 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ccr6O54689 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccr6O54689 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccr6O54689 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Gm11336-201ENSMUST00000118168 334 ntBASIC13.09□□□□□ -0.31
Ccr6O54689 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.09□□□□□ -0.31
Ccr6O54689 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccr6O54689 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccr6O54689 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccr6O54689 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Ccr6O54689 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccr6O54689 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccr6O54689 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccr6O54689 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.08□□□□□ -0.32
Ccr6O54689 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.08□□□□□ -0.32
Ccr6O54689 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.08□□□□□ -0.32
Ccr6O54689 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccr6O54689 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccr6O54689 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccr6O54689 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Ccr6O54689 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccr6O54689 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccr6O54689 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Ccr6O54689 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccr6O54689 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccr6O54689 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccr6O54689 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccr6O54689 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccr6O54689 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.06□□□□□ -0.32
Ccr6O54689 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccr6O54689 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ccr6O54689 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.06□□□□□ -0.32
Ccr6O54689 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccr6O54689 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccr6O54689 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms