Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Matn3O35701 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Matn3O35701 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Matn3O35701 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.18□□□□□ -0.14
Matn3O35701 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Matn3O35701 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Matn3O35701 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Matn3O35701 Gm38027-201ENSMUST00000192315 235 ntBASIC14.18□□□□□ -0.14
Matn3O35701 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.18□□□□□ -0.14
Matn3O35701 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Matn3O35701 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Matn3O35701 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.18□□□□□ -0.14
Matn3O35701 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Matn3O35701 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Matn3O35701 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.17□□□□□ -0.14
Matn3O35701 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Matn3O35701 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Matn3O35701 Mir5122-201ENSMUST00000175004 89 ntBASIC14.17□□□□□ -0.14
Matn3O35701 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.17□□□□□ -0.14
Matn3O35701 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Matn3O35701 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Matn3O35701 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Matn3O35701 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Matn3O35701 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Matn3O35701 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Matn3O35701 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.16□□□□□ -0.14
Matn3O35701 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.16□□□□□ -0.14
Matn3O35701 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Gm18421-201ENSMUST00000204122 625 ntBASIC14.16□□□□□ -0.14
Matn3O35701 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Matn3O35701 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Matn3O35701 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.15□□□□□ -0.14
Matn3O35701 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Matn3O35701 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Matn3O35701 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Matn3O35701 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Matn3O35701 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Matn3O35701 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Matn3O35701 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Matn3O35701 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Matn3O35701 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms