Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.89□□□□□ -0.19
Alx4O35137 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Alx4O35137 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Alx4O35137 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Alx4O35137 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Alx4O35137 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Gm14722-201ENSMUST00000118943 689 ntBASIC13.88□□□□□ -0.19
Alx4O35137 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.88□□□□□ -0.19
Alx4O35137 Gm22697-201ENSMUST00000175194 63 ntBASIC13.88□□□□□ -0.19
Alx4O35137 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Alx4O35137 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
Alx4O35137 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Alx4O35137 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Alx4O35137 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Alx4O35137 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.88□□□□□ -0.19
Alx4O35137 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Alx4O35137 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Alx4O35137 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.87□□□□□ -0.19
Alx4O35137 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Alx4O35137 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.87□□□□□ -0.19
Alx4O35137 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Alx4O35137 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Alx4O35137 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Alx4O35137 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Alx4O35137 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.86□□□□□ -0.19
Alx4O35137 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.86□□□□□ -0.19
Alx4O35137 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Alx4O35137 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Alx4O35137 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Alx4O35137 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Alx4O35137 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Alx4O35137 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.85□□□□□ -0.19
Alx4O35137 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Alx4O35137 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Alx4O35137 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Alx4O35137 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Alx4O35137 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Alx4O35137 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms