Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Atn1O35126 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.21■□□□□ 0.02
Atn1O35126 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Atn1O35126 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.2■□□□□ 0.02
Atn1O35126 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Gm17808-201ENSMUST00000200859 894 ntBASIC15.2■□□□□ 0.02
Atn1O35126 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Atn1O35126 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Atn1O35126 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atn1O35126 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.19■□□□□ 0.02
Atn1O35126 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Atn1O35126 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.19■□□□□ 0.02
Atn1O35126 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Atn1O35126 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Atn1O35126 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atn1O35126 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Atn1O35126 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Atn1O35126 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.18■□□□□ 0.02
Atn1O35126 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Atn1O35126 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.18■□□□□ 0.02
Atn1O35126 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.18■□□□□ 0.02
Atn1O35126 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Atn1O35126 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atn1O35126 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Atn1O35126 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.17■□□□□ 0.02
Atn1O35126 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.17■□□□□ 0.02
Atn1O35126 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Atn1O35126 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Olfr129-201ENSMUST00000122318 993 ntBASIC15.17■□□□□ 0.02
Atn1O35126 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.17■□□□□ 0.02
Atn1O35126 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.17■□□□□ 0.02
Atn1O35126 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Gm45328-201ENSMUST00000210942 917 ntBASIC15.17■□□□□ 0.02
Atn1O35126 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atn1O35126 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms