Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm4340L7N2C4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm4340L7N2C4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm4340L7N2C4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Gm4340L7N2C4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Gm4340L7N2C4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm4340L7N2C4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.54■□□□□ 0.56
Gm4340L7N2C4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Gm4340L7N2C4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Gm27301-201ENSMUST00000184012 127 ntBASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm4340L7N2C4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm4340L7N2C4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Gm4340L7N2C4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.52■□□□□ 0.55
Gm4340L7N2C4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm4340L7N2C4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm4340L7N2C4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 Gm12008-201ENSMUST00000117791 755 ntBASIC18.51■□□□□ 0.55
Gm4340L7N2C4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm4340L7N2C4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Gm15427-201ENSMUST00000117288 531 ntBASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Thap2-203ENSMUST00000218989 527 ntBASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Chchd1-203ENSMUST00000224633 557 ntBASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm4340L7N2C4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm4340L7N2C4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm4340L7N2C4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm4340L7N2C4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm4340L7N2C4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm4340L7N2C4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm4340L7N2C4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm4340L7N2C4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm4340L7N2C4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gm4340L7N2C4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Gm4340L7N2C4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms