Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Shisa8J3QNX5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Gm13436-201ENSMUST00000120418 567 ntBASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Gm30025-201ENSMUST00000218555 728 ntBASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Shisa8J3QNX5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Shisa8J3QNX5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Shisa8J3QNX5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shisa8J3QNX5 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shisa8J3QNX5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shisa8J3QNX5 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Shisa8J3QNX5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.21□□□□□ -0.14
Shisa8J3QNX5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shisa8J3QNX5 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Shisa8J3QNX5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Shisa8J3QNX5 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Shisa8J3QNX5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shisa8J3QNX5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Shisa8J3QNX5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shisa8J3QNX5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shisa8J3QNX5 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shisa8J3QNX5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shisa8J3QNX5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Shisa8J3QNX5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms