Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Sh3tc1G3X9F6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Gm5186-201ENSMUST00000218781 920 ntBASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh3tc1G3X9F6 Gm25287-201ENSMUST00000103846 110 ntBASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Gm22918-201ENSMUST00000103855 110 ntBASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Gm24158-201ENSMUST00000175263 71 ntBASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc1G3X9F6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Gm27430-201ENSMUST00000184585 107 ntBASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Gm44333-201ENSMUST00000197168 107 ntBASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc1G3X9F6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Sh3tc1G3X9F6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc1G3X9F6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc1G3X9F6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc1G3X9F6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc1G3X9F6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms