Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NpcdF8VQB8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.66■□□□□ 0.58
NpcdF8VQB8 Gm15693-201ENSMUST00000120470 637 ntBASIC18.66■□□□□ 0.58
NpcdF8VQB8 Gm12151-201ENSMUST00000121374 290 ntBASIC18.66■□□□□ 0.58
NpcdF8VQB8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.66■□□□□ 0.58
NpcdF8VQB8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.65■□□□□ 0.58
NpcdF8VQB8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.65■□□□□ 0.58
NpcdF8VQB8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NpcdF8VQB8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.65■□□□□ 0.58
NpcdF8VQB8 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.65■□□□□ 0.58
NpcdF8VQB8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NpcdF8VQB8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NpcdF8VQB8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Mir7684-201ENSMUST00000183858 60 ntBASIC18.64■□□□□ 0.57
NpcdF8VQB8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.64■□□□□ 0.57
NpcdF8VQB8 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Gm2423-201ENSMUST00000074863 733 ntBASIC18.64■□□□□ 0.57
NpcdF8VQB8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NpcdF8VQB8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Gm13223-201ENSMUST00000118609 747 ntBASIC18.63■□□□□ 0.57
NpcdF8VQB8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC18.63■□□□□ 0.57
NpcdF8VQB8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.63■□□□□ 0.57
NpcdF8VQB8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NpcdF8VQB8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NpcdF8VQB8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms