Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ccdc141E9Q8Q6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Gm14127-201ENSMUST00000117906 678 ntBASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Ccdc141E9Q8Q6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc141E9Q8Q6 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc141E9Q8Q6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Gm9719-201ENSMUST00000162765 543 ntBASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC23.13■■□□□ 1.29
Ccdc141E9Q8Q6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Gm6539-201ENSMUST00000119157 1064 ntBASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc141E9Q8Q6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Gm42466-201ENSMUST00000202099 1301 ntBASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc141E9Q8Q6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 Gm15635-204ENSMUST00000208024 2539 ntBASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC23.1■■□□□ 1.29
Ccdc141E9Q8Q6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Gm24543-201ENSMUST00000103867 82 ntBASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Gm6912-201ENSMUST00000117218 544 ntBASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 AC164567.1-201ENSMUST00000219185 960 ntBASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Asic1-205ENSMUST00000228185 1818 ntBASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc141E9Q8Q6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms