Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb9E9Q5G2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Gm11779-201ENSMUST00000118541 368 ntBASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.27■□□□□ 0.52
Pcdhb9E9Q5G2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb9E9Q5G2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb9E9Q5G2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb9E9Q5G2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb9E9Q5G2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb9E9Q5G2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Gm9727-201ENSMUST00000161387 555 ntBASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb9E9Q5G2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhb9E9Q5G2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdhb9E9Q5G2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms