Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd2E9PZM4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC21.15■□□□□ 0.98
Chd2E9PZM4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd2E9PZM4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd2E9PZM4 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.15■□□□□ 0.98
Chd2E9PZM4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chd2E9PZM4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd2E9PZM4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Chd2E9PZM4 Gm11478-201ENSMUST00000117851 599 ntBASIC21.14■□□□□ 0.97
Chd2E9PZM4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd2E9PZM4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Chd2E9PZM4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd2E9PZM4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Chd2E9PZM4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd2E9PZM4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd2E9PZM4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd2E9PZM4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Chd2E9PZM4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Gm18062-201ENSMUST00000208020 547 ntBASIC21.13■□□□□ 0.97
Chd2E9PZM4 Gm18055-201ENSMUST00000208254 547 ntBASIC21.13■□□□□ 0.97
Chd2E9PZM4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chd2E9PZM4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Gm5479-201ENSMUST00000160578 435 ntBASIC21.13■□□□□ 0.97
Chd2E9PZM4 Gm37748-201ENSMUST00000194379 1140 ntBASIC21.13■□□□□ 0.97
Chd2E9PZM4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC21.13■□□□□ 0.97
Chd2E9PZM4 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd2E9PZM4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd2E9PZM4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd2E9PZM4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Gm9908-201ENSMUST00000211534 448 ntBASIC21.11■□□□□ 0.97
Chd2E9PZM4 Gm18624-201ENSMUST00000220966 658 ntBASIC21.11■□□□□ 0.97
Chd2E9PZM4 Gm16476-201ENSMUST00000221544 139 ntBASIC21.11■□□□□ 0.97
Chd2E9PZM4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.11■□□□□ 0.97
Chd2E9PZM4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Chd2E9PZM4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Gm12091-201ENSMUST00000146791 830 ntBASIC21.11■□□□□ 0.97
Chd2E9PZM4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd2E9PZM4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Gm15593-201ENSMUST00000122085 1008 ntBASIC21.1■□□□□ 0.97
Chd2E9PZM4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.1■□□□□ 0.97
Chd2E9PZM4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.1■□□□□ 0.97
Chd2E9PZM4 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd2E9PZM4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd2E9PZM4 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Chd2E9PZM4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC21.09■□□□□ 0.97
Chd2E9PZM4 Gm8602-201ENSMUST00000184045 607 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms