Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp54bE9PXC0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp54bE9PXC0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp54bE9PXC0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp54bE9PXC0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp54bE9PXC0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp54bE9PXC0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Srp54bE9PXC0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srp54bE9PXC0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.3■□□□□ 0.04
Srp54bE9PXC0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srp54bE9PXC0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srp54bE9PXC0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srp54bE9PXC0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Gm26308-201ENSMUST00000157768 69 ntBASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.27■□□□□ 0.04
Srp54bE9PXC0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp54bE9PXC0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp54bE9PXC0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srp54bE9PXC0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms