Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.39■□□□□ 0.05
Col6a3E9PWQ3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Col6a3E9PWQ3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Col6a3E9PWQ3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.39■□□□□ 0.05
Col6a3E9PWQ3 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Col6a3E9PWQ3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.39■□□□□ 0.05
Col6a3E9PWQ3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col6a3E9PWQ3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Col6a3E9PWQ3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Gm27731-201ENSMUST00000185192 107 ntBASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Col6a3E9PWQ3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Gm11543-201ENSMUST00000120758 370 ntBASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Gm9797-201ENSMUST00000052902 613 ntBASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Gm36967-201ENSMUST00000193814 266 ntBASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Gm10766-202ENSMUST00000194123 606 ntBASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Gm27839-201ENSMUST00000184242 106 ntBASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Nsd1-205ENSMUST00000224693 852 ntBASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.37■□□□□ 0.05
Col6a3E9PWQ3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Gm16026-204ENSMUST00000162652 683 ntBASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Gm9719-201ENSMUST00000162765 543 ntBASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Rarb-207ENSMUST00000225921 2756 ntBASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Col6a3E9PWQ3 Gm24543-201ENSMUST00000103867 82 ntBASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Gm28911-201ENSMUST00000188837 117 ntBASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Gm3961-201ENSMUST00000204425 994 ntBASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Gm3436-201ENSMUST00000179930 840 ntBASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Gm9522-201ENSMUST00000182394 926 ntBASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Col6a3E9PWQ3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col6a3E9PWQ3 Mir6392-201ENSMUST00000184924 108 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms