Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Gm36967-201ENSMUST00000193814 266 ntBASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm28043E0CXC2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Gm28043E0CXC2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 App-207ENSMUST00000227737 2827 ntBASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm28043E0CXC2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Gm45328-201ENSMUST00000210942 917 ntBASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Gm28043E0CXC2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Gm28043E0CXC2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms