Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Gm7488-201ENSMUST00000117148 684 ntBASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Gm14767-201ENSMUST00000121559 586 ntBASIC15.84■□□□□ 0.13
Col4a6B1AVK5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Gm38225-201ENSMUST00000194001 393 ntBASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a6B1AVK5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a6B1AVK5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a6B1AVK5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Col4a6B1AVK5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a6B1AVK5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a6B1AVK5 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a6B1AVK5 Gm18049-201ENSMUST00000208909 581 ntBASIC15.83■□□□□ 0.13
Col4a6B1AVK5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a6B1AVK5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a6B1AVK5 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.82■□□□□ 0.12
Col4a6B1AVK5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Gm8410-201ENSMUST00000117225 605 ntBASIC15.82■□□□□ 0.12
Col4a6B1AVK5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a6B1AVK5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Gm7653-201ENSMUST00000214567 508 ntBASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.81■□□□□ 0.12
Col4a6B1AVK5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a6B1AVK5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a6B1AVK5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a6B1AVK5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Col4a6B1AVK5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms