Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.21■□□□□ 0.03
Chd3B1AR17 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.21■□□□□ 0.03
Chd3B1AR17 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.21■□□□□ 0.03
Chd3B1AR17 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.21■□□□□ 0.03
Chd3B1AR17 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.21■□□□□ 0.03
Chd3B1AR17 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chd3B1AR17 Gm14822-201ENSMUST00000122247 291 ntBASIC15.21■□□□□ 0.03
Chd3B1AR17 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Chd3B1AR17 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chd3B1AR17 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd3B1AR17 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd3B1AR17 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd3B1AR17 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.21■□□□□ 0.02
Chd3B1AR17 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd3B1AR17 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd3B1AR17 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chd3B1AR17 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.2■□□□□ 0.02
Chd3B1AR17 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chd3B1AR17 Gm6736-201ENSMUST00000166583 948 ntBASIC15.2■□□□□ 0.02
Chd3B1AR17 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.2■□□□□ 0.02
Chd3B1AR17 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.2■□□□□ 0.02
Chd3B1AR17 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Chd3B1AR17 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd3B1AR17 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Gm9385-201ENSMUST00000117563 472 ntBASIC15.2■□□□□ 0.02
Chd3B1AR17 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.2■□□□□ 0.02
Chd3B1AR17 Gm18489-201ENSMUST00000172565 551 ntBASIC15.2■□□□□ 0.02
Chd3B1AR17 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chd3B1AR17 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.19■□□□□ 0.02
Chd3B1AR17 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chd3B1AR17 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Chd3B1AR17 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.19■□□□□ 0.02
Chd3B1AR17 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Chd3B1AR17 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chd3B1AR17 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Chd3B1AR17 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.18■□□□□ 0.02
Chd3B1AR17 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Chd3B1AR17 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.18■□□□□ 0.02
Chd3B1AR17 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Chd3B1AR17 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.18■□□□□ 0.02
Chd3B1AR17 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd3B1AR17 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms