Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Gm46209-201ENSMUST00000217912 553 ntBASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Dupd1-202ENSMUST00000224735 548 ntBASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Gm9797-201ENSMUST00000052902 613 ntBASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shroom2A2ALU4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Shroom2A2ALU4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Shroom2A2ALU4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC24.24■■□□□ 1.47
Shroom2A2ALU4 Gm18222-201ENSMUST00000202416 1387 ntBASIC24.24■■□□□ 1.47
Shroom2A2ALU4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shroom2A2ALU4 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shroom2A2ALU4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC24.24■■□□□ 1.47
Shroom2A2ALU4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Shroom2A2ALU4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Gm16570-201ENSMUST00000161951 436 ntBASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Gm28911-201ENSMUST00000188837 117 ntBASIC24.23■■□□□ 1.47
Shroom2A2ALU4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Gm36858-201ENSMUST00000194501 2391 ntBASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Shroom2A2ALU4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Gm13233-201ENSMUST00000118760 1443 ntBASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Gm13244-201ENSMUST00000118855 1446 ntBASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Gm5356-201ENSMUST00000093326 615 ntBASIC24.22■■□□□ 1.47
Shroom2A2ALU4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Gm37466-201ENSMUST00000195692 652 ntBASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Gm5112-201ENSMUST00000204407 2368 ntBASIC24.21■■□□□ 1.47
Shroom2A2ALU4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Shroom2A2ALU4 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
Shroom2A2ALU4 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.47
Shroom2A2ALU4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC24.2■■□□□ 1.47
Shroom2A2ALU4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC24.2■■□□□ 1.47
Shroom2A2ALU4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Shroom2A2ALU4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shroom2A2ALU4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Shroom2A2ALU4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Shroom2A2ALU4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shroom2A2ALU4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Shroom2A2ALU4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.2■■□□□ 1.46
Shroom2A2ALU4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC24.19■■□□□ 1.46
Shroom2A2ALU4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms