Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Gm45328-201ENSMUST00000210942 917 ntBASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vma21-psA0A140T8R2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vma21-psA0A140T8R2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vma21-psA0A140T8R2 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vma21-psA0A140T8R2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms