Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm13559-201ENSMUST00000120476 863 ntBASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm7889-201ENSMUST00000185591 958 ntBASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Gm18959-201ENSMUST00000208954 655 ntBASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13d-4A0A0G2JFX3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms