Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atg4a-psA0A0G2JFS9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.9■□□□□ 0.62
Atg4a-psA0A0G2JFS9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atg4a-psA0A0G2JFS9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atg4a-psA0A0G2JFS9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atg4a-psA0A0G2JFS9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Atg4a-psA0A0G2JFS9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
Atg4a-psA0A0G2JFS9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Atg4a-psA0A0G2JFS9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Atg4a-psA0A0G2JFS9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Atg4a-psA0A0G2JFS9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm8318-201ENSMUST00000182954 872 ntBASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Mir8098-201ENSMUST00000184011 137 ntBASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Gm7230-201ENSMUST00000173026 815 ntBASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4a-psA0A0G2JFS9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atg4a-psA0A0G2JFS9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms