Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-4A0A075B6B4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Gm8344-201ENSMUST00000119813 856 ntBASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Gm19164-201ENSMUST00000210667 640 ntBASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-4A0A075B6B4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Gm8097-201ENSMUST00000117903 829 ntBASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav6-4A0A075B6B4 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.97□□□□□ -0.49
Trav6-4A0A075B6B4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms