Protein–RNA interactions for Protein: A0A075B647

Trav9-2, T cell receptor alpha variable 9-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-2A0A075B647 Gm18622-201ENSMUST00000219361 595 ntBASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Gm8655-201ENSMUST00000221159 852 ntBASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav9-2A0A075B647 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav9-2A0A075B647 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44357-201ENSMUST00000195897 142 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm19658-201ENSMUST00000196231 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44367-201ENSMUST00000196836 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44350-201ENSMUST00000197197 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44390-201ENSMUST00000197533 144 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44313-201ENSMUST00000198018 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44486-201ENSMUST00000198508 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44314-201ENSMUST00000199263 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44394-201ENSMUST00000199558 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44484-201ENSMUST00000199873 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44466-201ENSMUST00000200264 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm44359-201ENSMUST00000200671 138 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav9-2A0A075B647 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav9-2A0A075B647 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms