Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.21□□□□□ -0.13
Trav8n-2A0A075B633 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trav8n-2A0A075B633 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav8n-2A0A075B633 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav8n-2A0A075B633 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav8n-2A0A075B633 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Trav8n-2A0A075B633 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Trav8n-2A0A075B633 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav8n-2A0A075B633 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Gm20949-201ENSMUST00000206478 952 ntBASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav8n-2A0A075B633 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Rpph1-201ENSMUST00000175096 319 ntBASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav8n-2A0A075B633 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Mir449b-201ENSMUST00000104833 80 ntBASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Gm22175-201ENSMUST00000175007 78 ntBASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Gm8318-201ENSMUST00000182954 872 ntBASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Gm2272-201ENSMUST00000194903 582 ntBASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Gm7774-201ENSMUST00000200064 533 ntBASIC14.18□□□□□ -0.14
Trav8n-2A0A075B633 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms