Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
H2afb3S4R1G7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
H2afb3S4R1G7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Gm25016-201ENSMUST00000158399 131 ntBASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Gm45328-201ENSMUST00000210942 917 ntBASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
H2afb3S4R1G7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
H2afb3S4R1G7 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
H2afb3S4R1G7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms