Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac6Q9Z2V5 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hdac6Q9Z2V5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hdac6Q9Z2V5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Gm27437-201ENSMUST00000183429 107 ntBASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Gm27618-201ENSMUST00000183671 60 ntBASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Gm5745-201ENSMUST00000183748 313 ntBASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Hdac6Q9Z2V5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hdac6Q9Z2V5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Gm12151-201ENSMUST00000121374 290 ntBASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Gm23547-201ENSMUST00000158210 271 ntBASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Gm27306-201ENSMUST00000183970 107 ntBASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hdac6Q9Z2V5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms