Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Gm17271-201ENSMUST00000165535 355 ntBASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Smarcb1Q9Z0H3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smarcb1Q9Z0H3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Gm25911-201ENSMUST00000157621 56 ntBASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smarcb1Q9Z0H3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcb1Q9Z0H3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Smarcb1Q9Z0H3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms