Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cx3cr1Q9Z0D9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cx3cr1Q9Z0D9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Gm10653-202ENSMUST00000139570 835 ntBASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Gm26039-201ENSMUST00000158152 144 ntBASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Gm6257-201ENSMUST00000163864 910 ntBASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cx3cr1Q9Z0D9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cr1Q9Z0D9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.21□□□□□ -0.3
Cx3cr1Q9Z0D9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Cx3cr1Q9Z0D9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cr1Q9Z0D9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cr1Q9Z0D9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cr1Q9Z0D9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cr1Q9Z0D9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cx3cr1Q9Z0D9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.2□□□□□ -0.3
Cx3cr1Q9Z0D9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms