Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Olfr129-201ENSMUST00000122318 993 ntBASIC15.21■□□□□ 0.03
Cdh17Q9R100 Rprl3-201ENSMUST00000157400 290 ntBASIC15.21■□□□□ 0.03
Cdh17Q9R100 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.21■□□□□ 0.03
Cdh17Q9R100 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.21■□□□□ 0.03
Cdh17Q9R100 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Cdh17Q9R100 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.21■□□□□ 0.03
Cdh17Q9R100 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh17Q9R100 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.21■□□□□ 0.02
Cdh17Q9R100 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh17Q9R100 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh17Q9R100 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh17Q9R100 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cdh17Q9R100 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cdh17Q9R100 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Cdh17Q9R100 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm8825-201ENSMUST00000182565 998 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm4518-201ENSMUST00000182638 718 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm9172-201ENSMUST00000212092 954 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.2■□□□□ 0.02
Cdh17Q9R100 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cdh17Q9R100 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cdh17Q9R100 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.19■□□□□ 0.02
Cdh17Q9R100 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cdh17Q9R100 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cdh17Q9R100 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms