Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Phtf1Q9QZ09 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Phtf1Q9QZ09 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Gm27628-201ENSMUST00000184911 107 ntBASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Phtf1Q9QZ09 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Gm44771-201ENSMUST00000206975 626 ntBASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Phtf1Q9QZ09 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Gm14722-201ENSMUST00000118943 689 ntBASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Phtf1Q9QZ09 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Gm11764-201ENSMUST00000120221 623 ntBASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Phtf1Q9QZ09 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms