Protein–RNA interactions for Protein: Q9QXD8

Limd1, LIM domain-containing protein 1, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd1Q9QXD8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.13■□□□□ 0.33
Limd1Q9QXD8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Limd1Q9QXD8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Gm15427-201ENSMUST00000117288 531 ntBASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Gm8318-201ENSMUST00000182954 872 ntBASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Gm27301-201ENSMUST00000184012 127 ntBASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Gm27494-201ENSMUST00000184735 189 ntBASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Limd1Q9QXD8 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.11■□□□□ 0.33
Limd1Q9QXD8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Limd1Q9QXD8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Gm19891-201ENSMUST00000189771 303 ntBASIC17.09■□□□□ 0.33
Limd1Q9QXD8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Limd1Q9QXD8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms