Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Gm37722-201ENSMUST00000193757 208 ntBASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm4Q9QXA5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Sybu-209ENSMUST00000228639 4113 ntBASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Lsm4Q9QXA5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Gm13559-201ENSMUST00000120476 863 ntBASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Mir5130-201ENSMUST00000175160 84 ntBASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Gm45058-201ENSMUST00000205810 766 ntBASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Gm10812-201ENSMUST00000099864 546 ntBASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm4Q9QXA5 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm4Q9QXA5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms