Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.16□□□□□ -0.14
Prg4Q9JM99 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Gm11434-201ENSMUST00000122379 629 ntBASIC14.16□□□□□ -0.14
Prg4Q9JM99 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.16□□□□□ -0.14
Prg4Q9JM99 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.16□□□□□ -0.14
Prg4Q9JM99 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prg4Q9JM99 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.15□□□□□ -0.14
Prg4Q9JM99 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.15□□□□□ -0.14
Prg4Q9JM99 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Gm27525-201ENSMUST00000184465 107 ntBASIC14.15□□□□□ -0.14
Prg4Q9JM99 Gm42790-201ENSMUST00000201268 969 ntBASIC14.15□□□□□ -0.14
Prg4Q9JM99 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prg4Q9JM99 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Prg4Q9JM99 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.14□□□□□ -0.15
Prg4Q9JM99 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Gm27300-201ENSMUST00000184085 97 ntBASIC14.14□□□□□ -0.15
Prg4Q9JM99 Gm27335-201ENSMUST00000184758 97 ntBASIC14.14□□□□□ -0.15
Prg4Q9JM99 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.14□□□□□ -0.15
Prg4Q9JM99 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.14□□□□□ -0.15
Prg4Q9JM99 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Prg4Q9JM99 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.13□□□□□ -0.15
Prg4Q9JM99 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prg4Q9JM99 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Prg4Q9JM99 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prg4Q9JM99 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prg4Q9JM99 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Prg4Q9JM99 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.13□□□□□ -0.15
Prg4Q9JM99 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prg4Q9JM99 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Prg4Q9JM99 Gm11779-201ENSMUST00000118541 368 ntBASIC14.13□□□□□ -0.15
Prg4Q9JM99 Gm15467-201ENSMUST00000120582 445 ntBASIC14.13□□□□□ -0.15
Prg4Q9JM99 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Prg4Q9JM99 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms