Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Gm8318-201ENSMUST00000182954 872 ntBASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.44■□□□□ 0.22
Rfx5Q9JL61 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rfx5Q9JL61 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Gm18489-201ENSMUST00000172565 551 ntBASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Gm4899-201ENSMUST00000178708 719 ntBASIC16.43■□□□□ 0.22
Rfx5Q9JL61 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Gm9682-201ENSMUST00000197505 556 ntBASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rfx5Q9JL61 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.42■□□□□ 0.22
Rfx5Q9JL61 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rfx5Q9JL61 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Gm1401-201ENSMUST00000122048 772 ntBASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.41■□□□□ 0.22
Rfx5Q9JL61 AW822252-206ENSMUST00000208904 237 ntBASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.41■□□□□ 0.22
Rfx5Q9JL61 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms