Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trem1Q9JKE2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Gm42569-201ENSMUST00000200539 472 ntBASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trem1Q9JKE2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trem1Q9JKE2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trem1Q9JKE2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trem1Q9JKE2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trem1Q9JKE2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trem1Q9JKE2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.02□□□□□ -0.16
Trem1Q9JKE2 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trem1Q9JKE2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.02□□□□□ -0.16
Trem1Q9JKE2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.02□□□□□ -0.16
Trem1Q9JKE2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Gm4968-201ENSMUST00000071458 858 ntBASIC14.02□□□□□ -0.17
Trem1Q9JKE2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trem1Q9JKE2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Alkbh1-212ENSMUST00000185301 408 ntBASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trem1Q9JKE2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trem1Q9JKE2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trem1Q9JKE2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trem1Q9JKE2 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms