Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm29541-201ENSMUST00000191351 678 ntBASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Gm18057-201ENSMUST00000208220 503 ntBASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Gm5779-201ENSMUST00000218467 910 ntBASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Gm2810-201ENSMUST00000118681 990 ntBASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Gm10253-201ENSMUST00000194270 940 ntBASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.01■□□□□ 0.15
Scn5aQ9JJV9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Scn5aQ9JJV9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Scn5aQ9JJV9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Gm15693-201ENSMUST00000120470 637 ntBASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Gm17837-201ENSMUST00000186435 985 ntBASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Scn5aQ9JJV9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Scn5aQ9JJV9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Gm5866-201ENSMUST00000177881 973 ntBASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Gm27618-201ENSMUST00000183671 60 ntBASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Scn5aQ9JJV9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms