Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf13bQ9ET35 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf13bQ9ET35 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf13bQ9ET35 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf13bQ9ET35 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Tnfrsf13bQ9ET35 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf13bQ9ET35 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf13bQ9ET35 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf13bQ9ET35 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm13559-201ENSMUST00000120476 863 ntBASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Mir5130-201ENSMUST00000175160 84 ntBASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm29257-201ENSMUST00000186115 639 ntBASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm10812-201ENSMUST00000099864 546 ntBASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf13bQ9ET35 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm7367-201ENSMUST00000057611 492 ntBASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf13bQ9ET35 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf13bQ9ET35 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf13bQ9ET35 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf13bQ9ET35 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.27□□□□□ -0.44
Tnfrsf13bQ9ET35 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.27□□□□□ -0.44
Tnfrsf13bQ9ET35 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf13bQ9ET35 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf13bQ9ET35 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf13bQ9ET35 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tnfrsf13bQ9ET35 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Tnfrsf13bQ9ET35 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms