Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Gm7730-201ENSMUST00000212486 454 ntBASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-4Q9EQM3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-4Q9EQM3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Syt7-205ENSMUST00000224135 1557 ntBASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Gm7488-201ENSMUST00000117148 684 ntBASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-4Q9EQM3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nkx2-4Q9EQM3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.91■□□□□ 0.14
Nkx2-4Q9EQM3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms