Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Gm5312-201ENSMUST00000203728 547 ntBASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rrp8Q9DB85 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.23■□□□□ 0.03
Rrp8Q9DB85 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Gm44335-201ENSMUST00000196879 141 ntBASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Gm44297-201ENSMUST00000198304 141 ntBASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Gm44346-201ENSMUST00000198851 141 ntBASIC15.23■□□□□ 0.03
Rrp8Q9DB85 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rrp8Q9DB85 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Gm13365-201ENSMUST00000121188 973 ntBASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Gm45612-201ENSMUST00000211320 160 ntBASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Gm18246-201ENSMUST00000221023 728 ntBASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rrp8Q9DB85 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 AA543401-201ENSMUST00000164248 1269 ntBASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Thap2-203ENSMUST00000218989 527 ntBASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rrp8Q9DB85 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rrp8Q9DB85 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rrp8Q9DB85 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rrp8Q9DB85 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rrp8Q9DB85 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rrp8Q9DB85 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms