Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Chmp2aQ9DB34 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Gm28659-201ENSMUST00000188013 759 ntBASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Chmp2aQ9DB34 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Gm13884-201ENSMUST00000118103 829 ntBASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Gm6376-201ENSMUST00000209407 580 ntBASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Gm8655-201ENSMUST00000221159 852 ntBASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Prob1-201ENSMUST00000097619 3021 ntBASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Chmp2aQ9DB34 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Gm18622-201ENSMUST00000219361 595 ntBASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Chmp2aQ9DB34 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.27■□□□□ 0.19
Chmp2aQ9DB34 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Chmp2aQ9DB34 Gm6296-201ENSMUST00000222599 943 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms