Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Chmp4cQ9D7F7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Gm13836-201ENSMUST00000121159 501 ntBASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Chmp4cQ9D7F7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Gm15794-201ENSMUST00000120182 631 ntBASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 AA414768-201ENSMUST00000121924 1257 ntBASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.67■□□□□ 0.58
Chmp4cQ9D7F7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Chmp4cQ9D7F7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Chmp4cQ9D7F7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chmp4cQ9D7F7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chmp4cQ9D7F7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Chmp4cQ9D7F7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Olfr129-201ENSMUST00000122318 993 ntBASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Chmp4cQ9D7F7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Chmp4cQ9D7F7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Chmp4cQ9D7F7 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms