Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.13■□□□□ 0.33
Cfap53Q9D439 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm8825-201ENSMUST00000182565 998 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm4518-201ENSMUST00000182638 718 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.12■□□□□ 0.33
Cfap53Q9D439 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cfap53Q9D439 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Ank2-226ENSMUST00000189368 339 ntBASIC17.11■□□□□ 0.33
Cfap53Q9D439 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.11■□□□□ 0.33
Cfap53Q9D439 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap53Q9D439 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Gm12497-201ENSMUST00000138778 237 ntBASIC17.1■□□□□ 0.33
Cfap53Q9D439 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.1■□□□□ 0.33
Cfap53Q9D439 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap53Q9D439 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms