Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Gm11355-201ENSMUST00000121120 306 ntBASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Mrpl55Q9CZ83 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Gm26039-201ENSMUST00000158152 144 ntBASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Gm5587-201ENSMUST00000206270 674 ntBASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Mrpl55Q9CZ83 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 AC153526.5-201ENSMUST00000218661 2147 ntBASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 AC122351.1-201ENSMUST00000220467 126 ntBASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Mrpl55Q9CZ83 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms