Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim13Q9CYB0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trim13Q9CYB0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim13Q9CYB0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trim13Q9CYB0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trim13Q9CYB0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.45□□□□□ -0.1
Trim13Q9CYB0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Gm13474-201ENSMUST00000122466 815 ntBASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim13Q9CYB0 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Gm37055-201ENSMUST00000191866 133 ntBASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim13Q9CYB0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Gm16061-201ENSMUST00000122167 857 ntBASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim13Q9CYB0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms