Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sft2d3Q9CSV6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sft2d3Q9CSV6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Sft2d3Q9CSV6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sft2d3Q9CSV6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sft2d3Q9CSV6 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sft2d3Q9CSV6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sft2d3Q9CSV6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sft2d3Q9CSV6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Gm18195-201ENSMUST00000207604 706 ntBASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Rps4l-201ENSMUST00000071745 943 ntBASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sft2d3Q9CSV6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sft2d3Q9CSV6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sft2d3Q9CSV6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sft2d3Q9CSV6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sft2d3Q9CSV6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sft2d3Q9CSV6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Sft2d3Q9CSV6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.27□□□□□ -0.28
Sft2d3Q9CSV6 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.27□□□□□ -0.28
Sft2d3Q9CSV6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sft2d3Q9CSV6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Gm36967-201ENSMUST00000193814 266 ntBASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sft2d3Q9CSV6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms