Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTRAFQ9CQE8 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTRAFQ9CQE8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RTRAFQ9CQE8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RTRAFQ9CQE8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RTRAFQ9CQE8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RTRAFQ9CQE8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 BC037039-201ENSMUST00000192003 2205 ntBASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RTRAFQ9CQE8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Phf7-203ENSMUST00000226565 1971 ntBASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTRAFQ9CQE8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RTRAFQ9CQE8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms